Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3C8A4_TETNGIRS-type PTB domain-containing protein. (249 aa)    
Predicted Functional Partners:
H3CRH0_TETNG
Protein tyrosine phosphatase non-receptor type 6.
    
 0.532
H3CZX7_TETNG
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
 0.532
CRK
CRK proto-oncogene, adaptor protein.
    
 0.503
H3CKX2_TETNG
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.503
H3D9W3_TETNG
Uncharacterized protein.
    
 0.503
H3CEB3_TETNG
Growth factor receptor-bound protein 2b.
    
 0.498
H3CGC1_TETNG
GRB2 related adaptor protein b.
    
 0.498
H3D112_TETNG
GRB2 related adaptor protein 2a.
    
 0.498
H3D217_TETNG
GRB2 related adaptor protein a.
    
 0.498
Q4SF14_TETNG
Ubiquitin A-52 residue ribosomal protein fusion product 1.
     
  0.430
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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