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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3C8X5_TETNGUncharacterized protein. (208 aa)    
Predicted Functional Partners:
H3DKE3_TETNG
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.983
H3DDN7_TETNG
Ribosome production factor 1 homolog.
   
 
 0.966
H3CAN7_TETNG
Ribosome production factor 2 homolog.
   
 
 0.960
H3CHJ0_TETNG
Ribosomal RNA processing 1.
   
 
 0.960
H3CPZ2_TETNG
Brix domain containing 2.
   
 
 0.960
H3DMJ0_TETNG
Peter pan homolog.
   
 
 0.930
H3DMJ1_TETNG
Purinergic receptor P2Y11; Belongs to the G-protein coupled receptor 1 family.
   
 
 0.930
Q4SNJ7_TETNG
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.924
H3DL59_TETNG
EBNA1 binding protein 2.
   
  
 0.902
nip7
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly.
   
  
 0.882
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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