STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CA33_TETNGG patch domain containing 1. (781 aa)    
Predicted Functional Partners:
H3DM28_TETNG
Coiled-coil domain containing 12.
    
 0.962
H3DHN3_TETNG
Serine/arginine repetitive matrix 1.
     
 0.943
H3DHN7_TETNG
SYF2 pre-mRNA-splicing factor.
    
  0.927
H3CLE0_TETNG
WD repeat domain containing 83.
    
 
 0.926
H3D3X4_TETNG
Cell division cycle 40 homolog (S. cerevisiae).
    
  0.910
H3DB50_TETNG
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.906
H3DD24_TETNG
Peptidylprolyl isomerase (cyclophilin)-like 2.
   
  0.902
H3C0E7_TETNG
CWC22 spliceosome associated protein homolog.
    
  0.901
H3DII2_TETNG
YJU2 splicing factor homolog.
    
  0.884
Q4SRZ8_TETNG
Chromosome 18 SCAF14485, whole genome shotgun sequence.
    
 
 0.871
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.