Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
H3CA73_TETNGAT rich interactive domain 4A (RBP1-like). (1203 aa)    
Predicted Functional Partners:
H3DDU9_TETNG
SDS3 homolog, SIN3A corepressor complex component.
   
 0.967
H3DDM5_TETNG
Actin-like 6A; Belongs to the actin family.
   
 0.966
RBBP7
Chromosome undetermined SCAF7762, whole genome shotgun sequence.
   
 0.954
H3CQB1_TETNG
Sap30-like.
    
 0.954
H3D614_TETNG
WD_REPEATS_REGION domain-containing protein.
   
 0.954
H3DJC1_TETNG
Retinoblastoma binding protein 4.
   
 0.954
H3C458_TETNG
Sin3A-associated protein a.
    
 0.948
H3CCX4_TETNG
PHD finger protein 12b.
    
 
 0.946
H3C580_TETNG
SIN3 transcription regulator family member Aa.
   
 0.939
H3CFS8_TETNG
SIN3 transcription regulator family member Ab.
   
 0.939
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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