STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS17Ribosomal protein S17. (134 aa)    
Predicted Functional Partners:
H3BY52_TETNG
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.999
RPS20
Ribosomal protein S20.
   
 0.999
H3C4B5_TETNG
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 0.999
H3C9J8_TETNG
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.999
H3CB17_TETNG
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.999
H3CBA4_TETNG
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 0.999
Q4T9W7_TETNG
Chromosome undetermined SCAF7485, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.
  
 0.999
rps3a
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
H3CJS9_TETNG
Uncharacterized protein.
  
 0.999
RPS3
KH type-2 domain-containing protein.
  
 0.999
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.