STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CAI3_TETNGSi:dkey-3h3.3. (194 aa)    
Predicted Functional Partners:
DTX1
Deltex E3 ubiquitin ligase 1.
  
  
0.911
H3DMI5_TETNG
Notch receptor 3.
    
 0.908
H3DCB1_TETNG
Zgc:66440.
  
  
 
0.902
H3CU02_TETNG
Poly [ADP-ribose] polymerase.
   
 0.456
H3CU03_TETNG
Uncharacterized protein.
   
 0.408
Q4S542_TETNG
Chromosome 6 SCAF14737, whole genome shotgun sequence.
   
 0.408
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.