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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CAP7_TETNGAspartate aminotransferase. (413 aa)    
Predicted Functional Partners:
Q4RFD8_TETNG
Malate dehydrogenase.
   
 0.986
H3CT12_TETNG
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.970
H3CAM1_TETNG
Malate dehydrogenase.
   
 0.966
H3CP59_TETNG
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.956
H3D1E6_TETNG
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.956
H3D758_TETNG
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.954
H3CLQ9_TETNG
Sulfurtransferase.
  
 
 0.953
H3DNB7_TETNG
Sulfurtransferase.
  
 
 0.953
GPT
Glutamic--pyruvic transaminase.
   
 0.948
H3DBJ2_TETNG
Glutamic pyruvate transaminase (alanine aminotransferase) 2, like.
   
 0.948
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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