Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
H3CAQ2_TETNGCyclin D-type binding-protein 1. (326 aa)    
Predicted Functional Partners:
Q4SN88_TETNG
Chromosome 8 SCAF14543, whole genome shotgun sequence.
    
   0.922
H3CRF0_TETNG
INO80 complex subunit E.
    
   0.898
H3D0A0_TETNG
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
   0.896
Q4RZU7_TETNG
Chromosome 18 SCAF14786, whole genome shotgun sequence.
    
   0.881
H3DHN7_TETNG
SYF2 pre-mRNA-splicing factor.
    
 
 0.823
H3CXC0_TETNG
Nuclear factor related to kappaB binding protein.
    
   0.770
H3D112_TETNG
GRB2 related adaptor protein 2a.
    
 
 0.717
H3CD19_TETNG
Brain expressed, associated with NEDD4, 1.
      
 0.685
Q4SUS0_TETNG
Chromosome undetermined SCAF13844, whole genome shotgun sequence.
      
 0.629
H3CZ97_TETNG
Si:dkey-6b12.5.
    
 
 0.593
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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