STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CAQ2_TETNGCyclin D-type binding-protein 1. (326 aa)    
Predicted Functional Partners:
H3DHN7_TETNG
SYF2 pre-mRNA-splicing factor.
    
 
 0.615
H3D112_TETNG
GRB2 related adaptor protein 2a.
    
 
 0.590
H3DJV0_TETNG
Aminoadipate-semialdehyde dehydrogenase.
  
 0.542
Q4S9I3_TETNG
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.504
H3CD19_TETNG
Brain expressed, associated with NEDD4, 1.
      
 0.485
H3DLW9_TETNG
Nibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis.
    
 0.480
H3DG93_TETNG
BRCA1 associated RING domain 1.
    
 0.465
Q4SEC8_TETNG
Chromosome 3 SCAF14622, whole genome shotgun sequence.
  
 0.463
H3C0G9_TETNG
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.439
Q4SN88_TETNG
Chromosome 8 SCAF14543, whole genome shotgun sequence.
    
 
 0.411
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.