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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CAT0_TETNGUDP-glucose ceramide glucosyltransferase. (370 aa)    
Predicted Functional Partners:
THNSL1
Threonine synthase like 1.
  
 
 0.924
H3CH45_TETNG
Alcohol dehydrogenase iron containing 1.
  
 
 0.809
H3CF37_TETNG
Myocardin related transcription factor Ab.
  
 
 0.801
H3CY83_TETNG
IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family.
  
 0.758
H3DM59_TETNG
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
  
 0.758
H3CSA6_TETNG
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.748
H3CSA4_TETNG
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.747
Q4SJ46_TETNG
Chromosome 21 SCAF14577, whole genome shotgun sequence.
  
 0.709
RIDA
Reactive intermediate imine deaminase A homolog.
  
 0.709
H3CEW9_TETNG
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.644
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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