Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3CAU5_TETNGDEAH (Asp-Glu-Ala-His) box helicase 9. (1004 aa)    
Predicted Functional Partners:
H3CSC5_TETNG
Interleukin enhancer binding factor 3b.
   
 
 0.964
H3DGB9_TETNG
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
   
 
 0.912
H3C5Q4_TETNG
RRM domain-containing protein.
   
 
 0.895
H3CPQ0_TETNG
RRM domain-containing protein.
   
 
 0.895
MSL3
MSL complex subunit 3.
    
 
 0.892
H3CXP9_TETNG
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.891
H3DEJ6_TETNG
EWS RNA-binding protein 1b.
   
 0.887
H3CXK1_TETNG
MSL complex subunit 1b.
    
 0.884
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 0.882
H3CGK8_TETNG
Uncharacterized protein.
   
 
 0.873
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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