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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CAX5_TETNGUbiquinol-cytochrome c reductase complex assembly factor 1. (224 aa)    
Predicted Functional Partners:
H3CYN7_TETNG
Mitochondrial ribosomal protein L23.
   
 
 0.665
mt-cyb
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
    
 
 0.557
H3DP21_TETNG
TBC1 domain family, member 31.
      
 0.548
Q4SIZ7_TETNG
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 
 0.507
H3CZI8_TETNG
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
      
 0.495
H3DDX5_TETNG
BC1 (ubiquinol-cytochrome c reductase) synthesis-like; Belongs to the AAA ATPase family.
   
  
 0.479
H3CB67_TETNG
Heme-binding protein soul4.
    
 
 0.475
Q4SBG6_TETNG
Chromosome 11 SCAF14674, whole genome shotgun sequence.
   
 
 0.466
H3CLC4_TETNG
Mitochondrial ribosomal protein L45.
   
  
 0.463
H3CH32_TETNG
Cytochrome c oxidase assembly factor COX18.
   
  
 0.444
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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