Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
H3CAY7_TETNGVacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family. (568 aa)    
Predicted Functional Partners:
H3DKN5_TETNG
Rabenosyn, RAB effector.
    
 0.999
H3CY75_TETNG
Uncharacterized protein.
   
 
 0.979
H3CNP9_TETNG
Syntaxin 16; Belongs to the syntaxin family.
    
 
 0.978
H3CAJ0_TETNG
Syntaxin 6; Belongs to the syntaxin family.
    
 
 0.964
H3DMU8_TETNG
Vesicle transport through interaction with t-SNAREs 1B.
   
 
 0.953
H3D060_TETNG
VPS18 core subunit of CORVET and HOPS complexes.
    
 0.950
H3DD58_TETNG
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 
 0.911
H3CAD3_TETNG
Vesicle-associated membrane protein 4.
    
 
 0.903
H3CM63_TETNG
ERGIC and golgi 3.
 
      0.899
H3CIU3_TETNG
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.897
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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