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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CBT3_TETNGANK_REP_REGION domain-containing protein. (371 aa)    
Predicted Functional Partners:
H3CC60_TETNG
Inturned planar cell polarity protein.
   
 0.687
H3CQZ2_TETNG
Fizzy/cell division cycle 20 related 1b.
   
 0.687
H3DCT0_TETNG
Cell division cycle 20 homolog.
   
 0.687
H3DCT1_TETNG
Cell division cycle 20 homolog.
   
 0.687
FZR1
Fizzy/cell division cycle 20 related 1a.
   
 0.687
H3CLE6_TETNG
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.625
H3CD67_TETNG
Cell division cycle 27.
   
 0.612
H3CAW4_TETNG
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.607
H3CTQ9_TETNG
Wee1-like protein kinase.
   
 0.606
H3D899_TETNG
Wee1-like protein kinase.
   
 0.606
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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