STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CBY6_TETNGProtein interacting with prkca 1. (413 aa)    
Predicted Functional Partners:
H3CFM9_TETNG
Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 0.909
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.909
H3CKF1_TETNG
Glutamate receptor interacting protein 2b.
    
 0.727
H3DKK6_TETNG
Glutamate receptor interacting protein 2a.
    
 0.727
H3CM92_TETNG
Tetraspanin.
     
 0.691
H3DC08_TETNG
Tetraspanin.
     
 0.691
Q4TAT5_TETNG
Chromosome undetermined SCAF7261, whole genome shotgun sequence.
    
 0.685
Q4RAD7_TETNG
Chromosome undetermined SCAF23918, whole genome shotgun sequence.
    
 0.685
Q4RAD6_TETNG
Chromosome undetermined SCAF23919, whole genome shotgun sequence.
    
 0.685
H3CKM7_TETNG
N-ethylmaleimide-sensitive factor b.
   
 
 0.666
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.