STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CBZ2_TETNGPeptidase D. (501 aa)    
Predicted Functional Partners:
H3CU82_TETNG
Si:ch211-153b23.3.
    
  0.730
H3D6H9_TETNG
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
      
 0.597
H3CAU9_TETNG
Troponin T type 3a (skeletal, fast).
      
 0.592
H3DC43_TETNG
Troponin I type 1a (skeletal, slow).
      
 0.592
H3CHA3_TETNG
Mitochondrial intermediate peptidase.
   
 
 0.560
H3CNX6_TETNG
Ribosomal modification protein rimK-like family member A.
     
 0.555
H3CFU9_TETNG
Uncharacterized protein.
   
 
 0.552
H3DNR9_TETNG
Excision repair cross-complementation group 2.
   
  
 0.549
H3D0A0_TETNG
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
    
 
 0.510
TSFM
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
   
  
 0.490
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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