STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CC70_TETNGCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (392 aa)    
Predicted Functional Partners:
H3CBA7_TETNG
Uncharacterized protein.
   
 0.985
H3CTW4_TETNG
GABA(A) receptor-associated protein like 2.
   
 0.985
H3CAY0_TETNG
Microtubule-associated protein 1 light chain 3 alpha.
   
 0.978
H3CEZ7_TETNG
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.931
H3CKX3_TETNG
Unc-51 like autophagy activating kinase 1.
   
 
 0.931
H3DA63_TETNG
Unc-51 like autophagy activating kinase 2.
   
 
 0.931
Q4T2K1_TETNG
Chromosome undetermined SCAF10255, whole genome shotgun sequence.
   
 0.853
H3BZS7_TETNG
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
  
 0.835
H3CRQ2_TETNG
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
   
 
 0.826
H3DAG1_TETNG
Autophagy-related protein 3.
   
 
 0.824
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.