STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CC85_TETNGDelta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (720 aa)    
Predicted Functional Partners:
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.680
H3C784_TETNG
Notch receptor 1a.
   
0.635
H3DDS1_TETNG
Notch receptor 1b.
   
0.635
H3BYS2_TETNG
C2H2-type domain-containing protein.
    
 0.610
H3CDD6_TETNG
Zona pellucida protein AX 1.
      
 0.576
H3DKM8_TETNG
8-oxoguanine DNA glycosylase.
     
 0.571
H3D8W0_TETNG
Atypical chemokine receptor 3a; Belongs to the G-protein coupled receptor 1 family.
    
 0.561
H3DQB6_TETNG
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.560
H3CLJ3_TETNG
Neurogenin 1.
   
  
 0.521
H3CP94_TETNG
Period circadian clock 3.
      
 0.483
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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