Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3CCA5_TETNGRegulatory factor X, 1a (influences HLA class II expression). (963 aa)    
Predicted Functional Partners:
H3CG57_TETNG
Uncharacterized protein.
    
 
 0.948
H3BXU6_TETNG
Zinc finger and BTB domain containing 18.
    
 
 0.688
H3DQ41_TETNG
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.681
H3CEF8_TETNG
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.
    
   0.644
H3D162_TETNG
Fork-head domain-containing protein.
    
 
 0.602
H3D5V6_TETNG
Forkhead box J1b.
    
 
 0.602
H3DFW9_TETNG
V-myb avian myeloblastosis viral oncogene homolog.
    
 
 0.579
H3CHC6_TETNG
Neurofibromin 1b.
      
 0.571
RFX7
Regulatory factor X7.
    
 
 0.563
H3DBC7_TETNG
Forkhead box J3.
    
 
 0.512
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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