STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CCM1_TETNGCoiled-coil domain containing 102A. (572 aa)    
Predicted Functional Partners:
H3DJ21_TETNG
Kinectin 1.
      
 0.567
Q4RYE6_TETNG
Chromosome 2 SCAF14976, whole genome shotgun sequence.
      
 0.555
H3CGU0_TETNG
Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1.
    
 
 0.554
H3D7Q0_TETNG
Succinyl-CoA:glutarate-CoA transferase.
      
 0.531
H3CRW7_TETNG
Docking protein 6.
 
    
 0.415
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.