STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CCN0_TETNGSAM domain-containing protein. (279 aa)    
Predicted Functional Partners:
H3DLB6_TETNG
Ring finger protein 2.
    
 0.568
H3CG81_TETNG
Chromobox homolog 8b.
    
 0.523
H3DKW1_TETNG
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
 0.523
H3CRT3_TETNG
Bmi1 polycomb ring finger oncogene 1a.
    
 0.512
PCGF2
Polycomb group ring finger 2.
    
 0.512
H3CAX3_TETNG
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.490
H3BW60_TETNG
Uncharacterized protein.
    
 0.460
SCML2
Scm polycomb group protein like 2.
    
0.460
H3CVU2_TETNG
Scm polycomb group protein like 2.
    
0.460
H3C127_TETNG
Uncharacterized protein.
   
 0.458
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.