Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3CCW6_TETNGRing finger protein 170. (246 aa)    
Predicted Functional Partners:
H3CBN1_TETNG
Transmembrane and ubiquitin-like domain containing 1.
    
 
 0.969
H3CHB0_TETNG
Uncharacterized protein.
    
 
 0.879
H3D1I9_TETNG
Cholesterol 25-hydroxylase like 3.
    
 
 0.879
ERLIN1
ER lipid raft associated 1.
    
 
 0.879
H3CF74_TETNG
Transmembrane and ubiquitin-like domain containing 2.
    
 
 0.702
H3D7E8_TETNG
Mitochondrial ribosomal protein S2.
      
 0.685
H3DQV6_TETNG
Transmembrane protein 134.
      
 0.685
H3CNI8_TETNG
Uncharacterized protein.
      
 0.681
H3CQD6_TETNG
Protein phosphatase, Mg2+/Mn2+ dependent, 1E.
      
 0.667
H3CGL0_TETNG
Transmembrane protein 259.
      
 0.666
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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