STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CDD4_TETNGUncharacterized protein. (133 aa)    
Predicted Functional Partners:
H3CB35_TETNG
Prohibitin.
   
 0.997
H3CT03_TETNG
Complement component 1, q subcomponent binding protein.
   
 0.944
H3CVJ8_TETNG
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 0.823
H3CHP7_TETNG
Peptidase (mitochondrial processing) beta.
  
 0.822
Q4SBG6_TETNG
Chromosome 11 SCAF14674, whole genome shotgun sequence.
  
 0.822
H3DGS8_TETNG
Mitochondrial calcium uptake 1.
    
 0.793
H3CAA7_TETNG
Stomatin (EPB72)-like 2.
   
 
 0.769
H3D237_TETNG
Tu translation elongation factor, mitochondrial.
  
 
 0.766
Q4S9H0_TETNG
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.766
H3CBL8_TETNG
AFG3-like AAA ATPase 2; Belongs to the AAA ATPase family.
  
 0.743
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.