Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3CDG1_TETNGUncharacterized protein. (843 aa)    
Predicted Functional Partners:
H3CW38_TETNG
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.915
H3CRH8_TETNG
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.905
H3CE94_TETNG
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.875
Q4SF14_TETNG
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.811
H3CJ52_TETNG
Mitogen-activated protein kinase kinase kinase 7.
    
 0.759
H3CBI4_TETNG
Sequestosome 1.
    
 0.750
H3CBN0_TETNG
IBR domain-containing protein.
    
 0.747
H3CTG3_TETNG
Uncharacterized protein.
    
 0.747
H3DLA4_TETNG
Uncharacterized protein.
    
 0.747
Q4RGY9_TETNG
Chromosome undetermined SCAF15083, whole genome shotgun sequence.
    
  0.727
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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