Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
H3CDK8_TETNGGolgi associated, gamma adaptin ear containing, ARF binding protein 3a. (712 aa)    
Predicted Functional Partners:
H3DQL6_TETNG
ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family.
    
 0.981
H3DLT1_TETNG
Uncharacterized protein.
    
 
 0.938
H3CEX1_TETNG
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.936
H3CWI6_TETNG
Insulin-like growth factor 2 receptor.
    
 
 0.866
H3CWI7_TETNG
Uncharacterized protein.
    
 
 0.866
Q4SF14_TETNG
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.801
Q4RGY9_TETNG
Chromosome undetermined SCAF15083, whole genome shotgun sequence.
    
   0.801
H3D091_TETNG
Uncharacterized protein.
      
 0.686
Q4S214_TETNG
Chromosome undetermined SCAF14764, whole genome shotgun sequence.
      
 0.686
H3D309_TETNG
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
      
 0.629
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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