STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CDK9_TETNGDynein, axonemal, light intermediate chain 1. (253 aa)    
Predicted Functional Partners:
H3CTI2_TETNG
Uncharacterized protein.
  
 
 0.672
H3C1Y4_TETNG
Cytochrome b5 domain containing 1; Belongs to the cytochrome b5 family.
  
    0.605
H3CAM5_TETNG
Growth arrest-specific 8.
  
 
 
 0.554
H3CV81_TETNG
GAS domain-containing protein.
  
 
 
 0.546
H3D3Q2_TETNG
Tctex1 domain containing 2.
  
  
 0.531
H3C539_TETNG
Radial spoke head 9 homolog.
  
  
 0.527
H3D427_TETNG
EF-hand domain (C-terminal) containing 1.
  
  
 0.520
RSPH3
Radial spoke head 3.
  
 
 0.500
H3CAK1_TETNG
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
    0.497
H3CZI6_TETNG
Radial spoke head 3.
  
 
 0.494
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.