STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CDP6_TETNGSi:cabz01080528.1. (571 aa)    
Predicted Functional Partners:
H3DGB9_TETNG
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
   
 
 0.596
H3CTB6_TETNG
Poly (ADP-ribose) glycohydrolase a.
    
 0.584
H3D7S6_TETNG
Poly (ADP-ribose) glycohydrolase, like.
    
 0.584
H3DQ15_TETNG
Uncharacterized protein.
    
 0.584
H3DKB4_TETNG
Histone PARylation factor 1.
    
 
 0.582
H3D3A6_TETNG
Xeroderma pigmentosum, complementation group C.
    
 0.577
H3CF69_TETNG
H2A histone family, member Y2; Belongs to the histone H2A family.
    
 
 0.536
H3DFA2_TETNG
H2A histone family, member Y; Belongs to the histone H2A family.
    
 
 0.536
H3C2G7_TETNG
Tower domain-containing protein.
    
 0.533
H3BX47_TETNG
Xeroderma pigmentosum, complementation group A.
     
 0.531
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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