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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CDQ7_TETNGUncharacterized protein. (1604 aa)    
Predicted Functional Partners:
H3CKI1_TETNG
VPS9 domain-containing protein.
    
 0.940
H3CQK0_TETNG
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
 0.940
H3CTU3_TETNG
RAB guanine nucleotide exchange factor (GEF) 1.
    
 0.940
H3CTD9_TETNG
Zinc finger, AN1-type domain 4.
    
 0.910
H3BW56_TETNG
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.848
H3CNI0_TETNG
GTPase activating protein and VPS9 domains 1.
    
 0.669
H3CCH5_TETNG
Exportin 1 (CRM1 homolog, yeast) a.
    
 
 0.603
Q4T0N6_TETNG
Chromosome undetermined SCAF10916, whole genome shotgun sequence.
    
 
 0.603
H3CHZ4_TETNG
CRM1_C domain-containing protein.
    
 
 0.603
H3CKC8_TETNG
CRM1_C domain-containing protein.
    
 
 0.603
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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