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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CEA6_TETNGUncharacterized protein. (1877 aa)    
Predicted Functional Partners:
H3D075_TETNG
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.856
H3C4U1_TETNG
Nup214_FG domain-containing protein.
    
 0.566
H3BW56_TETNG
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.564
H3D4W9_TETNG
Achalasia, adrenocortical insufficiency, alacrimia.
    
 0.557
H3DH43_TETNG
GLE1 RNA export mediator.
    
 0.554
H3CM77_TETNG
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
     
 0.544
H3C0L3_TETNG
Uncharacterized protein.
    
 0.537
H3CNR0_TETNG
Ribonucleic acid export 1.
    
 0.527
H3D1Y0_TETNG
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
    
 0.518
H3D712_TETNG
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
    
 0.510
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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