STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CF06_TETNGDihydropyrimidinase like 2b. (544 aa)    
Predicted Functional Partners:
H3CJ20_TETNG
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.
  
 0.800
H3DI36_TETNG
Uridine monophosphate synthetase.
  
  
 0.721
H3CJN9_TETNG
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.704
Q4SRH2_TETNG
Chromosome undetermined SCAF14526, whole genome shotgun sequence.
  
 
 0.696
H3BXG6_TETNG
CPSase_sm_chain domain-containing protein.
  
 0.624
H3CBI2_TETNG
Carbamoyl-phosphate synthase 1, mitochondrial.
  
 0.624
H3CIP0_TETNG
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
  
 0.624
H3D8W8_TETNG
G protein-coupled receptor 143.
  
 0.621
H3C5P4_TETNG
Cytochrome b5 reductase 4.
  
 
 0.617
H3CBJ8_TETNG
FAD-binding FR-type domain-containing protein.
  
 
 0.617
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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