Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H3CF63_TETNGBrain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (270 aa)    
Predicted Functional Partners:
H3CQ28_TETNG
Tyrosine-protein kinase receptor.
   
 0.964
H3CY70_TETNG
Tyrosine-protein kinase receptor.
   
 0.964
H3DED0_TETNG
Tyrosine-protein kinase receptor.
   
 0.964
Q4SRB5_TETNG
Chromosome 11 SCAF14528, whole genome shotgun sequence.
    
 
 0.946
H3DCE8_TETNG
Sortilin.
    
 
 0.946
H3DC30_TETNG
Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.
   
 0.939
H3C9J1_TETNG
Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.
   
 0.919
Q4S8C9_TETNG
Tyrosine-protein kinase receptor.
   
 0.901
H3BYL3_TETNG
Peroxidasin.
      
 0.894
H3C119_TETNG
Methyl CpG binding protein 2.
    
 0.888
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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