STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CFM3_TETNGTranscription factor 3b. (494 aa)    
Predicted Functional Partners:
H3BVZ1_TETNG
T-cell acute lymphocytic leukemia 1.
    
 0.804
H3D1D9_TETNG
Achaete-scute family bHLH transcription factor 1b.
   
 0.733
H3DF37_TETNG
LIM domain only 2 (rhombotin-like 1).
    
 0.710
H3DP39_TETNG
Catenin (cadherin-associated protein), beta 1.
    
 0.671
H3C5X3_TETNG
Inhibitor of DNA binding 1, HLH protein.
    
 
 0.664
H3CP99_TETNG
Myogenin.
   
 0.645
H3CRY0_TETNG
Musculin (activated B-cell factor-1).
    
 0.631
H3DIV2_TETNG
Inhibitor of DNA binding 2a.
    
 
 0.611
myf6
Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity).
    
 0.593
H3C144_TETNG
Myogenic factor.
    
 0.579
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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