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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CFY9_TETNGUncharacterized protein. (135 aa)    
Predicted Functional Partners:
H3C4L3_TETNG
Fibronectin type-III domain-containing protein.
 
   
  0.785
H3CW45_TETNG
Solute carrier family 35 member C1.
   
  
 0.579
H3DIY5_TETNG
Solute carrier family 38 member 6.
   
  
 0.573
H3CKQ0_TETNG
Solute carrier family 35 member E1.
      
 0.569
H3CFR4_TETNG
Solute carrier family 35 member E3.
      
 0.567
H3CGK0_TETNG
RNA 3'-terminal phosphate cyclase.
   
  
 0.562
H3DF00_TETNG
Solute carrier family 35 member B4.
      
 0.558
H3CDP3_TETNG
Solute carrier family 35 member B3.
      
 0.556
H3C0B9_TETNG
Uncharacterized protein.
   
  
 0.532
Q4RQZ5_TETNG
Chromosome 14 SCAF15003, whole genome shotgun sequence.
      
 0.515
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.