STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CH19_TETNGMakorin, ring finger protein, 2. (406 aa)    
Predicted Functional Partners:
H3CGU7_TETNG
HECT domain-containing protein.
     
 0.722
H3CCY4_TETNG
Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily.
   
 
 0.592
H3CP78_TETNG
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.588
H3D504_TETNG
Raf-1 proto-oncogene, serine/threonine kinase a.
     
 0.561
Q4RGY9_TETNG
Chromosome undetermined SCAF15083, whole genome shotgun sequence.
    
  0.549
H3C502_TETNG
Uncharacterized protein.
   
    0.478
GCA
Grancalcin.
   
    0.478
H3D8U7_TETNG
Glycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily.
 
 
 
 0.441
H3CKE5_TETNG
Unnamed protein product; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.
     
 0.413
H3CX66_TETNG
Transmembrane phosphatase with tensin homology.
     
 0.413
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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