STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CI52_TETNGStomatin. (282 aa)    
Predicted Functional Partners:
H3D894_TETNG
Ring finger protein 141.
      
 0.629
Q4S178_TETNG
Chromosome 13 SCAF14769, whole genome shotgun sequence.
      
 0.629
H3CBL8_TETNG
AFG3-like AAA ATPase 2; Belongs to the AAA ATPase family.
  
 0.553
H3CGF7_TETNG
Si:ch1073-174d20.2; Belongs to the AAA ATPase family.
  
 0.553
H3CR20_TETNG
YME1-like 1b.
  
 0.553
H3CR92_TETNG
AAA domain-containing protein.
  
 0.553
H3CVJ8_TETNG
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 0.553
H3D807_TETNG
YME1-like 1a.
  
 0.553
H3DDX5_TETNG
BC1 (ubiquinol-cytochrome c reductase) synthesis-like; Belongs to the AAA ATPase family.
  
 0.553
H3CT03_TETNG
Complement component 1, q subcomponent binding protein.
   
 0.543
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.