STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CI78_TETNGZgc:153240. (392 aa)    
Predicted Functional Partners:
H3DAA8_TETNG
Vacuolar protein sorting 25 homolog.
   
 0.959
H3CXK2_TETNG
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
    
 0.945
H3CX68_TETNG
Vacuolar protein sorting 36 homolog.
    
 0.940
Q4SFE2_TETNG
Chromosome 2 SCAF14604, whole genome shotgun sequence.
   
 0.876
H3DJ03_TETNG
Uncharacterized protein.
    
 0.871
H3CUU5_TETNG
Family with sequence similarity 91 member A1.
    
 
 0.851
H3CUV5_TETNG
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.810
H3CTW0_TETNG
Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.
    
 0.807
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
    
 0.807
VPS4B-2
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
    
 0.807
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.