STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CIN9_TETNGDnaJ (Hsp40) homolog, subfamily C, member 5 gamma a. (182 aa)    
Predicted Functional Partners:
H3CF85_TETNG
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.781
H3DM99_TETNG
Heat shock cognate 70; Belongs to the heat shock protein 70 family.
 
 0.779
HSPA8
Chromosome 7 SCAF14557, whole genome shotgun sequence; Belongs to the heat shock protein 70 family.
 
 0.778
H3CWV8_TETNG
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.767
H3CKF5_TETNG
Heat shock protein 9; Belongs to the heat shock protein 70 family.
 
 0.766
H3DEQ6_TETNG
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
    
 
 0.755
Q4RBN1_TETNG
Chromosome undetermined SCAF21072, whole genome shotgun sequence.
 
 0.749
Q4RCI5_TETNG
Chromosome undetermined SCAF18850, whole genome shotgun sequence.
 
 0.743
H3CZE3_TETNG
Crooked neck pre-mRNA splicing factor 1.
    
 
 0.730
Q4SRZ8_TETNG
Chromosome 18 SCAF14485, whole genome shotgun sequence.
    
   0.726
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.