STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CIU3_TETNGt-SNARE coiled-coil homology domain-containing protein. (239 aa)    
Predicted Functional Partners:
H3CY75_TETNG
Uncharacterized protein.
   
 0.982
H3DMU8_TETNG
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.976
H3CNP9_TETNG
Syntaxin 16; Belongs to the syntaxin family.
    
 0.974
H3DHC6_TETNG
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.937
H3CBX7_TETNG
Syntaxin 12; Belongs to the syntaxin family.
    
 0.932
H3D054_TETNG
Syntaxin 7-like; Belongs to the syntaxin family.
    
 0.932
H3DD58_TETNG
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 0.931
H3D060_TETNG
VPS18 core subunit of CORVET and HOPS complexes.
    
 
 0.895
H3CZN4_TETNG
VPS51 subunit of GARP complex.
    
 0.885
H3CZ34_TETNG
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
    
 
 0.881
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.