STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CJU5_TETNGTBC1 domain family, member 22B. (360 aa)    
Predicted Functional Partners:
H3CBZ9_TETNG
Uncharacterized protein.
    
 
 0.500
H3CFY0_TETNG
RAB1B, member RAS oncogene family b.
    
 
 0.500
H3CCM7_TETNG
Mitochondrial ribosomal protein S35.
    
   0.463
Q4T9G5_TETNG
Chromosome undetermined SCAF7571, whole genome shotgun sequence.
   
   0.445
H3BVW3_TETNG
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.444
H3C285_TETNG
Mitochondrial ribosomal protein L43.
    
   0.434
H3CWZ5_TETNG
S5 DRBM domain-containing protein.
    
   0.434
H3CYN7_TETNG
Mitochondrial ribosomal protein L23.
    
   0.434
H3D2Y1_TETNG
Mitochondrial ribosomal protein L46.
    
   0.434
Q4RXN3_TETNG
Chromosome 11 SCAF14979, whole genome shotgun sequence; Belongs to the bacterial ribosomal protein bL20 family.
    
   0.434
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.