STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CJW4_TETNGXPG_I_2 domain-containing protein. (667 aa)    
Predicted Functional Partners:
H3DIS1_TETNG
Uncharacterized protein.
    
 0.640
H3CBP2_TETNG
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.629
H3CWZ8_TETNG
Survival of motor neuron 1, telomeric.
    
 0.571
H3DJY4_TETNG
Programmed cell death 2.
      
 0.566
H3CIW7_TETNG
MUS81 structure-specific endonuclease subunit.
    
 0.564
H3D242_TETNG
DNA polymerase.
   
 0.560
H3BZY8_TETNG
Sodium/potassium transporting ATPase interacting 2.
      
 0.550
H3C768_TETNG
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.548
H3DGW9_TETNG
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
     
 0.540
Q4SQY6_TETNG
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.521
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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