STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q4SX60_TETNGChromosome undetermined SCAF12961, whole genome shotgun sequence. (113 aa)    
Predicted Functional Partners:
Q4T106_TETNG
Chromosome undetermined SCAF10768, whole genome shotgun sequence.
 
     0.919
H3CVC1_TETNG
Myotubularin related protein 10.
   
0.605
H3CDS5_TETNG
UDENN domain-containing protein.
   
 0.482
H3CE88_TETNG
Uncharacterized protein.
   
0.482
H3CEE9_TETNG
GRAM domain-containing protein.
   
 0.482
H3CIT0_TETNG
SET binding factor 2.
   
 0.482
H3CK34_TETNG
UDENN domain-containing protein.
   
 0.482
H3CK35_TETNG
SET binding factor 1.
   
0.482
H3CIL4_TETNG
Uncharacterized protein.
  
  
  0.480
H3DAY9_TETNG
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
     
 0.446
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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