STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATAD1ATPase family AAA domain containing 1; Belongs to the AAA ATPase family. (284 aa)    
Predicted Functional Partners:
H3DCQ5_TETNG
UBX domain-containing protein 7.
   
 0.965
H3D2U9_TETNG
NPL4 homolog, ubiquitin recognition factor.
   
 0.694
H3DER6_TETNG
Ubiquitin recognition factor in ER associated degradation 1.
   
 0.691
H3C0N9_TETNG
Peroxisomal biogenesis factor 19.
    
 0.666
H3D920_TETNG
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.666
H3DI99_TETNG
SH3 domain-containing protein.
    
 0.666
H3DCI8_TETNG
Peroxisomal biogenesis factor 14.
    
 0.645
H3DHB3_TETNG
UBX domain protein 1.
   
 0.628
H3CE18_TETNG
Peroxisomal biogenesis factor 3.
     
 0.620
H3DJ03_TETNG
Uncharacterized protein.
   
 0.606
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.