STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CLD8_TETNGCoiled-coil domain containing 130. (198 aa)    
Predicted Functional Partners:
H3D9P1_TETNG
Pre-mRNA processing factor 19.
    
   0.935
H3CIF0_TETNG
Elongation factor Tu GTP binding domain containing 2.
    
   0.923
H3CWV8_TETNG
CDC5 cell division cycle 5-like (S. pombe).
    
   0.923
H3D3X4_TETNG
Cell division cycle 40 homolog (S. cerevisiae).
    
 
 0.923
H3BXZ9_TETNG
Uncharacterized protein.
    
   0.866
H3CGZ7_TETNG
Junction plakoglobin a.
    
   0.866
H3DIS4_TETNG
Uncharacterized protein.
    
   0.866
H3C5M8_TETNG
G patch domain containing 11.
    
 
 0.613
H3D557_TETNG
Small nuclear ribonucleoprotein polypeptide F.
      
 0.563
H3CLS0_TETNG
Uncharacterized protein.
    
   0.546
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.