STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CM76_TETNGF-box protein 3. (483 aa)    
Predicted Functional Partners:
Q4T9N8_TETNG
Chromosome undetermined SCAF7519, whole genome shotgun sequence; Belongs to the SKP1 family.
    
 
 0.920
H3CA40_TETNG
Cullin 1b; Belongs to the cullin family.
    
 
 0.842
H3CV48_TETNG
BUD22 domain-containing protein.
  
  
 0.713
H3DD91_TETNG
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.713
H3DHK5_TETNG
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.713
H3DK04_TETNG
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.713
H3CCT3_TETNG
Transforming growth factor beta regulator 1.
      
 0.569
H3CHN5_TETNG
Ring-box 1, E3 ubiquitin protein ligase.
    
 
 0.555
H3DQ05_TETNG
F-box and leucine-rich repeat protein 15.
      
 0.555
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
  
 0.550
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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