STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CMI1_TETNGWD repeat-containing protein 35. (1181 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
  
 0.997
H3CJ78_TETNG
WD repeat domain 19.
  
 0.996
H3C169_TETNG
Tetratricopeptide repeat domain 21B.
   
 0.995
H3D5J8_TETNG
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.995
IFT43
Intraflagellar transport 43.
    
 0.995
H3CQI9_TETNG
Intraflagellar transport 80 homolog (Chlamydomonas).
  
 0.904
H3DJH0_TETNG
Tetratricopeptide repeat domain 26.
  
 
 0.840
H3DE04_TETNG
Intraflagellar transport 88 homolog.
  
  
 0.836
H3CU11_TETNG
TNF receptor-associated factor 3 interacting protein 1.
  
  
 0.833
H3CIP1_TETNG
Intraflagellar transport 172.
  
  
 0.825
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.