STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CMM4_TETNGCleavage stimulation factor, 3' pre-RNA, subunit 1. (431 aa)    
Predicted Functional Partners:
H3DHH9_TETNG
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
    
 0.982
H3D8H2_TETNG
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
 0.972
H3D3V6_TETNG
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.955
Q4S730_TETNG
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.955
H3CL89_TETNG
Cleavage and polyadenylation specific factor 4.
   
 0.905
Q4SIH0_TETNG
Chromosome 5 SCAF14581, whole genome shotgun sequence.
     
 0.866
YTHDC2
YTH domain containing 2.
   
 
 0.843
H3D6T5_TETNG
YTH domain containing 1.
    
 
 0.833
H3CEP6_TETNG
FIP1 like 1b (S. cerevisiae).
    
 0.828
H3CGM7_TETNG
Uncharacterized protein.
   
 0.817
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.