STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CMS4_TETNGFamily with sequence similarity 192 member A. (236 aa)    
Predicted Functional Partners:
H3C411_TETNG
Dharma.
    
   0.923
Q4RYJ6_TETNG
Chromosome 2 SCAF14976, whole genome shotgun sequence.
    
 
 0.875
H3DD02_TETNG
Cactin.
    
 
 0.855
H3CCS4_TETNG
Pre-mRNA processing factor 8.
    
   0.853
H3CNE9_TETNG
Uncharacterized protein.
    
   0.853
H3CWV8_TETNG
CDC5 cell division cycle 5-like (S. pombe).
    
   0.853
H3CV86_TETNG
Cap methyltransferase 2.
      
 0.647
Q4T604_TETNG
Chromosome undetermined SCAF9013, whole genome shotgun sequence.
   
  
 0.574
H3CEF3_TETNG
Exosome component 6.
   
  
 0.574
H3CV90_TETNG
Component of oligomeric golgi complex 4.
      
 0.571
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.