STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CP14_TETNGKeratin 4; Belongs to the intermediate filament family. (201 aa)    
Predicted Functional Partners:
H3C6V8_TETNG
IF rod domain-containing protein; Belongs to the intermediate filament family.
 
     0.828
H3D6D1_TETNG
BCL2 associated athanogene 3.
    
 0.533
Q4RGY9_TETNG
Chromosome undetermined SCAF15083, whole genome shotgun sequence.
    
  0.506
Q4SF14_TETNG
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
  0.481
H3CRF0_TETNG
INO80 complex subunit E.
   
 0.442
H3CGU7_TETNG
HECT domain-containing protein.
     
 0.435
H3CGZ9_TETNG
Keratin 15; Belongs to the intermediate filament family.
  
0.434
H3DQG6_TETNG
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
0.431
H3D3M2_TETNG
Ubiquitin-conjugating enzyme E2Na; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.420
H3DMA3_TETNG
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.420
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.