STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3CPU9_TETNGDynein, cytoplasmic 2, light intermediate chain 1. (349 aa)    
Predicted Functional Partners:
H3CJY9_TETNG
WD repeat domain 60.
    
 0.996
H3CAY1_TETNG
Dynein light chain roadblock.
    
 0.931
H3D3I7_TETNG
Dynein light chain roadblock.
    
 0.906
H3CBU1_TETNG
WD repeat domain 34.
    
 0.872
H3D3Q2_TETNG
Tctex1 domain containing 2.
   
 0.872
H3DR71_TETNG
WD_REPEATS_REGION domain-containing protein.
    
 0.872
H3CM13_TETNG
Intraflagellar transport 57 homolog (Chlamydomonas).
     
 0.851
H3DE04_TETNG
Intraflagellar transport 88 homolog.
   
 0.826
H3CQI9_TETNG
Intraflagellar transport 80 homolog (Chlamydomonas).
     
 0.818
H3CIP1_TETNG
Intraflagellar transport 172.
     
 0.817
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.