STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP54Nucleoporin 54. (508 aa)    
Predicted Functional Partners:
H3BW56_TETNG
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.998
NUP62
Nucleoporin 62.
   
 0.998
H3CJM7_TETNG
Nucleoporin 58.
   
 0.996
H3CTQ6_TETNG
Nucleoporin 205.
   
 0.996
H3CTT8_TETNG
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.996
H3CQG4_TETNG
Nucleoporin 98.
   
 0.995
H3CLD1_TETNG
Nucleoporin 133.
   
 0.994
H3D309_TETNG
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.994
H3CAQ3_TETNG
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.991
H3D712_TETNG
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
   
 0.989
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.