STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAND1Heart and neural crest derivatives expressed 1. (193 aa)    
Predicted Functional Partners:
H3CFM3_TETNG
Transcription factor 3b.
    
 0.470
H3CVA9_TETNG
Transcription factor 12.
    
 0.470
TCF4
Transcription factor 4.
    
 0.470
H3D864_TETNG
BHLH domain-containing protein.
    
 0.470
H3DCZ2_TETNG
Transcription factor 3a.
    
 0.470
H3DI63_TETNG
NK2 homeobox 5.
   
 
 0.458
H3DLC6_TETNG
mRNA cap guanine-N7 methyltransferase.
      
 0.445
H3CED3_TETNG
LIM domain binding 1a.
    
 0.414
H3CGZ5_TETNG
LIM-domain binding 1b.
    
 0.414
H3D683_TETNG
LIM domain binding 2a.
    
 0.414
Your Current Organism:
Tetraodon nigroviridis
NCBI taxonomy Id: 99883
Other names: T. nigroviridis, spotted green pufferfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.